# Datasets

Jump to the page of [demo datasets](https://en.stomics.tech/resources/demo-data/list.html) for more exploration. Original input files and analysis results can be obtained there.

STOmics R\&D has pre-built reference genome index files that can be used directly. Download the references you need from [Download Center](https://stereotoolss-organization.gitbook.io/saw-user-manual-v8.0/download-center#reference-download).

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"Kit version" records the input information of the SAW count `--kit-version` argument.
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## Stereo-seq N Formalin Fixed & Paraffin Embedded (FFPE)

<table data-full-width="false"><thead><tr><th width="199">Dataset</th><th width="119">Chip size</th><th width="137">Kit version</th><th width="89">Pipeline version</th><th width="90">Species</th><th width="168">Disease state</th><th width="116">Anatomical tissue </th><th width="150">Staining method</th></tr></thead><tbody><tr><td><a href="https://en.stomics.tech/col1357/index">C04144D5_mouse_brain_Stereo-seq_N_FFPE</a></td><td>1 cm x 1 cm</td><td>Stereo-seq N FFPE V1.0</td><td>≥ SAW 8.0</td><td>Mouse</td><td>Healthy</td><td>Brain</td><td>ssDNA</td></tr><tr><td><a href="https://en.stomics.tech/col1281/index">C04138G3_mouse_brain_Stereo-seq_N_FFPE</a></td><td>1 cm x 1 cm</td><td>Stereo-seq N FFPE V1.0</td><td>≥ SAW 8.0</td><td>Mouse</td><td>Healthy</td><td>Brain</td><td>H&#x26;E</td></tr><tr><td><a href="https://en.stomics.tech/col1261/index">C04496D6_mouse_brain_Stereo-seq_N_FFPE</a></td><td>1 cm x 1 cm</td><td>Stereo-seq N FFPE V1.0</td><td>≥ SAW 8.0</td><td>Mouse</td><td>Healthy</td><td>Brain</td><td>H&#x26;E</td></tr><tr><td><a href="https://en.stomics.tech/col1271/index">C04495G4_mouse_lung_microorganism_Stereo-seq_N_FFPE</a></td><td>1 cm x 1 cm</td><td>Stereo-seq N FFPE V1.0</td><td>≥ SAW 8.0</td><td>Mouse</td><td>Infected with <em>Mycobacterium tuberculosis</em></td><td>Lung</td><td>H&#x26;E</td></tr></tbody></table>

## Stereo-seq T Fresh Frozen (FF)

<table data-full-width="false"><thead><tr><th width="203">Dataset</th><th width="118">Chip size</th><th width="134">Kit version</th><th width="101">Pipeline version</th><th width="91">Species</th><th width="159">Disease state</th><th width="121">Anatomical tissue </th><th width="163">Staining method</th></tr></thead><tbody><tr><td><a href="https://en.stomics.tech/col1311/index">SS200000135TL_D1_mouse_brain_Stereo-seq_T_FF</a></td><td>1 cm x 1 cm</td><td>Stereo-seq T FF V1.2</td><td>≥ SAW 5.5</td><td>Mouse</td><td>Healthy</td><td>Brain</td><td>ssDNA</td></tr><tr><td><a href="https://en.stomics.tech/col1331/index">FP200009107_E414_mouse_olfactory_bulb_Stereo-seq_T_FF</a></td><td>0.5 cm x 0.5 cm</td><td>Stereo-seq T FF V1.2</td><td>≥ SAW 6.1</td><td>Mouse</td><td>Healthy</td><td>Olfactory bulb</td><td>DAPI</td></tr><tr><td><a href="https://en.stomics.tech/col1321/index">B01207E3G4_v6.1_rat_brain_Stereo-seq_T_FF</a></td><td>2 cm x 3 cm</td><td>Stereo-seq T FF V1.2</td><td>≥ SAW 6.1</td><td>Rat</td><td>Healthy</td><td>Brain</td><td>ssDNA</td></tr><tr><td><a href="https://en.stomics.tech/col1341/index">C02533C1_mouse_kidney_Stereo-seq_T_FF</a></td><td>1 cm x 1 cm</td><td>Stereo-seq T FF V1.2</td><td>≥ SAW 7.0</td><td>Mouse</td><td>Healthy</td><td>Kidney</td><td>H&#x26;E</td></tr></tbody></table>